Publications of S.

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234 publication entries, 117 of them (printed in bold in the list) acknowledge the project support.
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Paper (reviewed)

Bazhenov et al. 2011	Bazhenov, M., Lonjers, P., Skorheim, S., Bedard, C. and Destexhe, A.	Non-homogeneous extracellular resistivity affects the current-source density profiles of up/down state oscillations	Phil. Trans. R. Soc. A (2011) 369:3802-3819 doi:10.1098/rsta.2011.0119	abstract, fulltext
Bedard et al. 2011	Bédard, C., Béhuret, S., Deleuze, C., Bal, T. and Destexhe, A.	Oversampling method to extract excitatory and inhibitory conductances from single-trial membrane potential recordings	J Neurosci Meth (2012) 210 (1): 3 - 14 doi:10.1016/j.jneumeth.2011.09.010	fulltext
Behuret et al. 2013	Behuret, S., Deleuze, C., Gomez, L., Fregnac, Y. and Bal, T.	Cortically-Controlled Population Stochastic Facilitation as a Plausible Substrate for Guiding Sensory Transfer across the Thalamic Gateway	PLoS Comput Biol (2013) 9(12): e1003401 doi:10.1371/journal.pcbi.1003401	fulltext
Benjaminsson and Lansner 2012	Benjaminsson, S. and Lansner, A.	Nexa: A scalable neural simulator with integrated analysis	Network: Computation in Neural Systems (2012) 23: 254-271 doi:10.3109/0954898X.2012.737087	abstract, fulltext
Blackman et al 2014	A. V. Blackman, S. Grabuschnig, R. Legenstein, and P. J. Sjöström	A comparison of manual neuronal reconstruction from biocytin histology or 2-photon imaging: morphometry and computer modeling	Frontiers in neuroanatomy (2014) : 8 doi:10.3389/fnana.2014.00065	abstract, fulltext
Bogadhi et al. 2013	Bogadhi, A., Montagnini, A. and Masson, G.S.	Dynamical interaction between retinal and extra-retinal signals in motion integration for smooth pursuit	Journal of Vision (2013) 13(13): 5 doi:10.1167/13.13.5	fulltext
Borgelt et al. 2012	Borgelt, C., Braune, C., Kötter, T. and Grün, S.	New algorithms for finding approximate frequent item sets	Soft Computing (2012) 16(5): 903-917 doi:10.1007/s00500-011-0776-2	abstract, fulltext
Brüderle et al. 2011	Brüderle, D., Petrovici, M. A., Vogginger, B., Ehrlich, M., Pfeil, T., Millner, S., Grübl, A., Wendt, K., Müller, E., Schwartz, M.-O., de Oliveira, D. H., Jeltsch, S., Fieres, J., Schilling, M., Müller, P., Breitwieser, O., Petkov, V., Muller, L., Davison, A. P., Krishnamurthy, P., Kremkow, J., Lundqvist, M., Muller, E., Partzsch, J., Scholze, S., Zühl, L., Mayr, C., Destexhe, A., Diesmann, M., Potjans, T. C., Lansner, A., Schüffny, R., Schemmel, J. and Meier, K.	A comprehensive workflow for general-purpose neural modeling with highly configurable neuromorphic hardware systems	Biological Cybernetics (2011) 104(4-5): 263-296 doi:10.1007/s00422-011-0435-9	abstract, fulltext
Deco at al. 2014b	Deco, G., McIntosh, A.R., Shen, K., Hutchison, R.M., Menon, R.S., Everling, S., Hagmann, P. and Jirsa, V.K.	Identification of Optimal Structural Connectivity Using Functional Connectivity and Neural Modeling	The Journal of Neuroscience (2014) 34(23): 7910-7916 doi:10.1523/JNEUROSCI.4423-13.2014	fulltext
DeFelipe et al. 2013	DeFelipe, J., Lopez-Cruz, P.L., Benavides-Piccione, R., Bielza, C., Larranaga, P., Anderson, S., Burkhalter, A., Cauli, B., Fairen, A., Feldmeyer, D., Fishell, G., Fitzpatrick, D., Freund, T.F., Gonzalez-Burgos, G., Hestrin, S., Hill, S., Hof, P.R., Huang, J., Jones, E.G., Kawaguchi, Y., Kisvarday, Z., Kubota, Y., Lewis, D.A., Marin, O., Markram, H., McBain, C.J., Meyer, H.S., Monyer, H., Nelson, S.B., Rockland, K., Rossier, J., Rubenstein, J.L.R., Rudy, B., Scanziani, M., Shepherd, G.M., Sherwood, C.C., Staiger, J.F., Tamas, G., Thomson, A., Wang, Y., Yuste, R. and Ascoli, G.A.	New insights into the classification and nomenclature of cortical GABAergic interneurons	Nature Reviews Neuroscience (2013) 14: 202-216 doi:10.1038/nrn3444	(fulltext)
Deger et al. 2012	Deger, M., Helias, M., Rotter, S. and Diesmann, M.	Spike-Timing Dependence of Structural Plasticity Explains Cooperative Synapse Formation in the Neocortex	PLoS Comput Biol (2012) 8(9): e1002689 doi:10.1371/journal.pcbi.1002689
Dehghani et al. 2012	Dehghani, N., Hatsopoulos, N.G., Haga, Z.D., Parker, R.A., Greger, B., Halgren, E., Cash, S.S., and Destexhe, A.	Avalanche analysis from multielectrode ensemble recordings in cat, monkey, and human cerebral cortex during wakefulness and sleep	Frontiers in Physiology (2012) 3: 302 doi:10.3389/fphys.2012.00302	abstract, fulltext
Deneux et al. 2012b	Deneux, T., Takerkart, S., Grinvald, A., Masson, G.S. and Vanzetta, I.	A processing work-flow for measuring erythrocytes velocity in extended vascular networks from wide field high-resolution optical imaging data.	Neuroimage (2012) 59: 2569-2588 doi:10.1016/j.neuroimage.2011.08.081	fulltext
Denker et al. 2011c	Denker, M., Roux, S., Lindén, H., Diesmann, M., Riehle, A. and Grün, S.	The local field potential reflects surplus spike synchrony	Cerebral Cortex (2011) 21:2681-2695 doi:10.1093/cercor/bhr040	abstract, fulltext
Devor et al. 2013	Devor, A., Bandettini, P., Boas, D., Bower, J., Buxton, R., Cohen, L., Dale, A., Einevoll, G., Fox, P., Franceschini, M., Friston, K., Fujimoto, J., Geyer, M., Greenberg, J., Halgren, E., Hamalainen, M., Helmchen, F., Hyman, B., Jasanoff, A., Jernigan, T., Judd, L., Kim, S.-G., Kleinfeld, D., Kopell, N., Kutas, M., Kwong, K., Larkum, M., Lo, E., Magistretti, P., Mandeville, J., Masliah, E., Mitra, P., Mobley, W., Moskowitz, M., Nimmerjahn, A., Reynolds, J., Rosen, B., Salzberg, B., Schaffer, C., Silva, G., So, P., Spitzer, N., Tootell, R., Essen, D. V., Vanduffel, W., Vinogradov, S., Wald, L., Wang, L., Weber, B. and Yodh, A.	The challenge of connecting the dots in the B.R.A.I.N.	Neuron (2013) 80: 270-274 doi:10.1016/j.neuron.2013.09.008	abstract
El Boustani et al. 2012	El Boustani, S., Yger, P., Frégnac, Y. and Destexhe, A.	Stable Learning in Stochastic Network States	The Journal of Neuroscience (2012) 32(1): 194-214 doi:10.1523/JNEUROSCI.2496-11.2012	fulltext
Estebanez et al. 2012	Estebanez, L., Boustani, S. E., Destexhe, A. and Shulz, D. E.	Correlated input reveals coexisting coding schemes in a sensory cortex	Nature Neuroscience (2012) 15: 1691-1699 doi:10.1038/nn.3258	abstract, (fulltext)
Garcia et al. 2014	Garcia, S., Guarino, D., Jaillet, F., Jennings, T.R., Pröpper, R., Rautenberg, P.L., Rodgers, C., Sobolev, A., Wachtler, T., Yger, P. and Davison, A.P.	Neo: an object model for handling electrophysiology data in multiple formats	Front. Neuroinform. (2014) 8:10 doi:10.3389/fninf.2014.00010	abstract, fulltext
Gerstein et al. 2012	Gerstein, G.L., Williams, E.R., Diesmann, M., Grün, S. and Trengove, C.	Detecting synfire chains in parallel spike data	Journal of Neuroscience Methods (2012) 206(1): 54-64 doi:10.1016/j.jneumeth.2012.02.003	fulltext
Grassia et al. 2011	Grassia, F., Buhry, L., Levi, T., Tomas, J., Destexhe, A. and Saaghi, S.	Tunable neuromimetic integrated system for emulating cortical neuron models	Front. Neurosci. (2011) 5:134 doi:10.3389/fnins.2011.00134
Habenschuss et al. 2013	Habenschuss, S., Puhr, H. and Maass, W.	Emergence of Optimal Decoding of Population Codes Through STDP	Neural Computation (2013) 25(6): 1371-1407 doi:10.1162/NECO_a_00446	abstract, fulltext
Halnes et al. 2013	G. Halnes, I. Ostby, K.H. Pettersen, S.W. Omholt, and G.T. Einevoll	Electrodiffusive model for astrocytic and neuronal ion concentration dynamics	PLoS Computational Biology (2013) 9:e1003386 doi:10.1371/journal.pcbi.1003386	abstract, fulltext
Helias et al. 2011	Helias, M., Deger, M., Rotter, S. and Diesmann, M.	Finite post synaptic potentials cause a fast neuronal response	Front. Neurosci. (2011) 5:19 doi:10.3389/fnins.2011.00019	abstract, fulltext
Helias et al. 2012	Helias, M., Kunkel, S., Masumoto, G., Igarashi, J., Eppler, J. M., Ishii, S., Fukai, T., Morrison, A. and Diesmann, M.	Supercomputers ready for use as discovery machines for neuroscience	Front. Neuroinform. (2012) 6:26 doi:10.3389/fninf.2012.00026	fulltext
Henker et al. 2012	Henker, S., Partzsch, J. and Schüffny, R.	Accuracy evaluation of numerical methods used in state-of-the-art simulators for spiking neural networks	Journal of Computational Neuroscience (2012) 32(2): 309-326 doi:10.1007/s10827-011-0353-9	fulltext
Indiveri et al. 2011	Indiveri, G., Linares-Barranco, B., Hamilton, T. J., van Schaik, A., Etienne-Cummings, R., Delbruck, T., Liu, S.-C., Dudek, P., Häfliger, P., Renaud, S., Schemmel, J., Cauwenberghs, G., Arthur, J., Hynna, K., Folowosele, F., Saïghi, S., Serrano-Gotarredona, T., Wijekoon, J., Wang, Y. and Boahen, K.	Neuromorphic silicon neuron circuits	Front. Neurosci. (2011) 5:73 doi:10.3389/fnins.2011.00073	fulltext
Ito et al. 2014	Ito, J., Roy, S., Liu, Y., Cao, Y., Fletcher, M., Lu, L., Boughter, J. D., Grün, S. and Heck, H.	Whisker barrel cortex delta oscillations and gamma power in the awake mouse are linked to respiration	Nature Communications (2014) 5: 3572 doi:10.1038/ncomms4572	fulltext
Kaplan et al. 2013	Kaplan, B.A., Lansner, A., Masson, G.S. and Perrinet, L.U.	Anisotropic connectivity implements motion-based prediction in a spiking neural network	Front. Comput. Neurosci. (2013) 7:112 doi:10.3389/fncom.2013.00112
Kerr et al.	Kerr, C.C., van Albada, S., Neymotin, S.A., Chadderdon, G.L., Robinson, P.A., and Lytton, W.W.	Cortical information flow in Parkinson's disease: a composite network/field model	Front Comput Neurosci. (2013) 7:39 doi:10.3389/fncom.2013.0003	fulltext
Khoei et al. 2013	Khoei, M.A., Masson, G.S. and Perrinet, L.U.	Motion-based prediction explains the role of tracking in motion extrapolation	Journal of Physiology (2013) 107: 409-420 doi:10.1016/j.jphysparis.2013.08.001	(fulltext)
Klampfl and Maass 2013	S. Klampfl and W. Maass	Emergence of dynamic memory traces in cortical microcircuit models through STDP	The Journal of Neuroscience (2013) 33(28): 11515-11529 doi:10.1523/JNEUROSCI.5044-12.2013	abstract, (fulltext)
Kriener et al. 2014b	Helias, M., Rotter, S., Diesmann, M. and Einevoll, G. T.	How pattern formation in ring networks of excitatory and inhibitory spiking neurons depends on the input current regime	Frontiers in computational neuroscience (2014) 7: 1 doi:10.3389/fncom.2013.00187	fulltext
Kunkel et al. 2011	Kunkel, S., Diesmann, M. and Morrison, A.	Limits to the Development of Feed-Forward Structures in Large Recurrent Neuronal Networks	Front. Comput. Neurosci. (2011) 4:160 doi:10.3389/fncom.2010.00160	abstract, fulltext
Kunkel et al. 2011b	Kunkel, S., Potjans, T.C., Eppler, J.M., Plesser, H.E., Morrison, A. and Diesmann, M.	Meeting the memory challenges of brain-scale network simulation	Front. Neuroinform. (2011) 5:35 doi:10.3389/fninf.2011.00035	abstract
Kunkel et al. 2014	Kunkel, S., Schmidt, M., Eppler, J.M., Plesser, H.E., Masumoto, G., Igarashi, J., Ishii, S., Fukai, T., Morrison, A., Diesmann, M. and Helias, M.	Spiking network simulation code for petascale computers	Front. Neuroinform. (2014) 8:78 doi:10.3389/fninf.2014.00078	abstract, fulltext
Ledberg et al. 2012	Ledberg, A., Montagnini, A., Coppola, R. and Bressler, S.L.	Reduced Variability of Ongoing and Evoked Cortical Activity Leads to Improved Behavioral Performance	PLoS ONE (2012) 7: e43166 doi:10.1371/journal.pone.0043166	fulltext
Leski et al. 2013	S.Leski, H. Linden, T. Tetzlaff, K.H. Pettersen, G.T. Einevoll	Frequency dependence of signal power and spatial reach of the local field potential	PLoS Computational Biology (2013) 9:e1003137 doi:10.1371/journal.pcbi.1003137	abstract, fulltext
Leskiet al 2013	Łeski, S., Lindén, H., Tetzlaff, T., Pettersen, K. H. and Einevoll, G. T.	Frequency Dependence of Signal Power and Spatial Reach of the Local Field Potential	PLoS Computational Biology (2013) 9(7): e1003137 doi:10.1371/journal.pcbi.1003137	fulltext
Lindén et al. 2011	Lindén, H., Tetzlaff, T., Potjans, T.C., Pettersen, K.H., Grün, S., Diesmann, M. and Einevoll, G.T.	Modeling the spatial reach of the LFP	Neuron (2011) 72(5): 859-872 doi:10.1016/j.neuron.2011.11.006	fulltext
Linden et al. 2014	Lindén, H., Hagen, E., Łeski, S., Norheim, E. S., Pettersen, K. H. and Einevoll, G. T.	LFPy: a tool for biophysical simulation of extracellular potentials generated by detailed model neurons	Front. Neuroinform. (2014) 7:41 doi:10.3389/fninf.2013.00041	abstract, fulltext
Masson and Perrinet 2012	Masson, G. S. and Perrinet, L. U.	The behavioral receptive field underlying motion integration for primate tracking eye movements	Neuroscience & Biobehavioral Reviews (2012) 36(1): 1-25 doi:10.1016/j.neubiorev.2011.03.009	fulltext
Mayrhofer et al. 2013	Mayrhofer, J.M., Skreb, V., von der Behrens, W., Musall, S., Weber, B. and Haiss, F.	Novel two-alternative forced choice paradigm for bilateral vibrotactile whisker frequency discrimination in head-fixed mice and rats	AJP - JN Physiol (2013) 109(1): 273-284 doi:10.1152/jn.00488.2012	abstract, (fulltext)
Milekovic et al. 2015	Milekovic, T., Truccolo, W., Grün, S., Riehle, A. and Brochier, T.	Local field potentials in primate motor cortex encode grasp kinetic parameters	Neuroimage (2015) 114: 338-355 doi:10.1016/j.neuroimage.2015.04.008	fulltext
Musall et al. 2014	Musall, S., von der Behrens, W., Mayrhofer, J.M., Weber ,B., Helmchen, F. and Haiss F.	Tactile frequency discrimination is enhanced by circumventing neocortical adaptation	Nature Neuroscience (2014) 17(11): 1567-1573 doi:10.1038/nn.3821	abstract, (fulltext)
Navaridasa et al. 2013	Navaridasa, J., Furbera, S., Garsidea, J., Jinb, X., Khanc, M., Lestera, D., Lujã¡na, M., Miguel-Alonsod, J., Painkrasa, E., Pattersona, C., Planaa, L. A., Rasta, A., Richardsa, D., Shib, Y., Templea, S., Wue, J. and Yangf, S.	SpiNNaker: Fault tolerance in a power- and area- constrained large-scale neuromimetic architecture	Parallel Computing (2013) 39(11): 693-708 doi:10.1016/j.parco.2013.09.001	fulltext
Perrinet and Masson 2012	Perrinet, L.U. and Masson, G.S.	Motion-based prediction is sufficient to solve the aperture problem	Neural Computation (2012) 24(10): 2726-2750 doi:10.1162/NECO_a_00332	abstract, (fulltext)
Peyrache et al. 2012	Peyrache, A., Dehghani, N., Eskandar, E.N., Madsen, J.R., Anderson, W.S., Donoghue, J.S., Hochberg, L.R., Halgren, E., Cash, S.S., and Destexhe, A.	Spatiotemporal dynamics of neocortical excitation and inhibition during human sleep	PNAS (2012) 109 (5): 1731-1736 doi:10.1073/pnas.1109895109	abstract, fulltext
Pfeil et al. 2012	Pfeil, T., Grübl, A., Jeltsch, S., Müller, E., Müller, P., Petrovici, M., Schmuker, M., Brüderle, D., Schemmel, J. and Meier, K.	Six networks on a universal neuromorphic computing substrate	Front. Neurosci. (2013) 7:11 (Pre-print: http://arxiv.org/abs/1210.7083) doi:10.3389/fnins.2013.00011	abstract
Pfeil et al. 2012b	Pfeil, T., Potjans, T. C., Schrader, S., Potjans, W., Schemmel, J., Diesmann, M. and Meier, K.	Is a 4-bit synaptic weight resolution enough? - constraints on enabling spike-timing dependent plasticity in neuromorphic hardware	Front. Neurosci. (2012) 6:90 doi:10.3389/fnins.2012.00090	abstract, fulltext
Picado-Muiño et al. 2013	Picado-Muiño D, Borgelt C, Berger D, Gerstein G, Grün S.	Finding neural assemblies with frequent item set mining	Frontiers in neuroinformatics (2013) 7:1-15 doi:10.3389/fninf.2013.00009	abstract, fulltext
Pozzorini et al. 2013	Pozzorini, C., Naud, R., Mensi, S. and Gerstner, W.	Temporal whitening by power-law adaptation in neocortical neurons	Nature Neuroscience (2013) 16: 942-948 doi:10.1038/nn.3431	abstract
Rankin et al. 2013b	Rankin, J., Meso, A. I., Masson, G.S., Faugeras, O. and Kornprobst, P.	Bifurcation study of a neural field competition model with an application to perceptual switching in motion integration	Journal of Computational Neuroscience (2013) September: 1-21 doi:10.1007/s10827-013-0465-5	fulltext
Reynaud et al. 2012	Reynaud, A., Masson, G. S. and Chavane, F.	Dynamics of Local Input Normalization Result from Balanced Short- and Long-Range Intracortical Interactions in Area V1	The Journal of Neuroscience (2012) 32(36):12558 - 12569 doi:10.1523/JNEUROSCI.1618-12.2012	fulltext
Riehle et al. 2013	Riehle, A., Wirtssohn, S., Grün, S. and Brochier, T.	Mapping the spatio-temporal structure of motor cortical LFP and spiking activities during reach-to-grasp movements	Front. Neural Circuits (2013) 7:48 doi:10.3389/fncir.2013.00048	fulltext
Rombouts et al. 2015	Rombouts, J.O., Bohte, S.M. and Roelfsema, P.R.	How Attention Can Create Synaptic Tags for the Learning of Working Memories in Sequential Tasks	PLoS Comput Biol (2015) 11(3): e1004060 doi:10.1371/journal.pcbi.1004060	fulltext
Rombouts et al. 2015b	Rombouts, J. O., Bohte, S. M., Martinez-Trujillo, J. and Roelfsema, P. R.	A learning rule that explains how rewards teach attention	Visual Cognition (2015) 33:179-205 doi:10.1080/13506285.2015.1010462	abstract
Sanz Leon et al. 2012	Sanz Leon, P., Vanzetta, I., Masson, G.S. and Perrinet, L.U.	Motion Clouds: model-based stimulus synthesis of natural-like random textures for the study of motion perception	AJP - JN Physiol (2012) 107 (11): 3217-3226 doi:10.1152/jn.00737.2011	abstract, (fulltext)
Schain et al. 2013	Schain, M., Benjaminsson, S., Varnäs, K., Forsberg, A., Halldin, C., Lansner, A., Farde, L. and Varrone, A.	Arterial input function derived from pairwise correlations between PET-image voxels	J Cereb Blood Flow Metab (2013) 33:1058-1065 doi:10.1038/jcbfm.2013.47	(fulltext)
Scholze et al. 2011	Scholze, S., Eisenreich, H., Höppner, S., Ellguth, G., Henker, S., Ander, M., Hänzsche, S., Partzsch, J., Mayr, C. and Schüffny, R.	A 32 GBit/s communication SoC for a waferscale neuromorphic system	Integration, the VLSI Journal (Elsevier) (2011) 45(1): 61-75, doi:10.1016/j.vlsi.2011.05.003
Scholze et al. 2011b	Scholze, S., Schiefer, S., Partzsch, J., Hartmann, S., Mayr, C., Höppner, S., Eisenreich, H., Henker, S., Vogginger, B. and Schüffny, R.	VLSI implementation of a 2.8 Gevent/s packet based AER interface with routing and event sorting functionality	Frontiers in Neuromorphic Engineering (2011) 5:117 doi:10.3389/fnins.2011.00117
Schultze-Kraft et al. 2013	Schultze-Kraft, M., Diesmann, M., Grün, S. and Helias, M.	Noise Suppression and Surplus Synchrony by Coincidence Detection	PLoS Comput Biol. (2013) 9(4):e1002904 doi:10.1371/journal.pcbi.1002904
Simoncini et al. 2012	Simoncini, C., Perrinet, L.U., Montagnini, A., Mamassian, P. and Masson G.S.	More is not always better: pooling motion information differently for perception or action	Nature Neuroscience (2012) 15: 1596-1603 doi:10.1038/nn.3229	fulltext
Takerkart et al. 2014	Takerkart, S., Katz, P., Garcia, F., Roux, S., Reynaud, A. and Chavane, F.	Vobi One: a data processing software package for functional optical imaging.	Front. Neurosci. (2014) 8:2 doi:10.3389/fnins.2014.00002	fulltext
Torre et al. 2013	Torre E, Picado-Muiño D, Denker M, Borgelt C, Grün S.	Statistical evaluation of synchronous spike patterns extracted by frequent item set mining	Front Comput Neurosci. (2013) 7:132. doi:10.3389/fncom.2013.00132	fulltext
van Albada et al. 2015	van Albada, S.J., Helias, M. and Diesmann, M.	Scalability of Asynchronous Networks Is Limited by One-to-One Mapping between Effective Connectivity and Correlations	PLoS Comput Biol (2015) 11(9): e1004490 doi:10.1371/journal.pcbi.1004490
Vella et al. 2014	Vella, M., Cannon, R.C., Crook, S., Davison, A.P., Ganapathy, G., Robinson, H.P.C., Silver, R.A. and Gleeson, P.	libNeuroML and PyLEMS: using Python to combine procedural and declarative modelling approaches in computational neuroscience	Frontiers in Neuroinformatics (2014) 8: 38 doi:10.3389/fninf.2014.00038	abstract
Vogels et al 2013	T. P. Vogels, R. C. Froemke, N. Doyon, M. Gilson, J. S. Haas, R. Liu, A. Maffei, P. Miller, C. J. Wierenga, M. A. Woodin, F. Zenke and H. Sprekeler	Inhibitory synaptic plasticity: spike timing-dependence and putative network function	Frontiers In Neural Circuits (2013) : 7 doi:10.3389/fncir.2013.00119	fulltext
Vogginger et al. 2015	Vogginger, B., Schüffny, R., Lansner, A., Cederström, L., Partzsch, J. and Höppner, S.	Reducing the computational footprint for real-time BCPNN learning	Front. Neurosci. (2015) 9:2 doi:10.3389/fnins.2015.00002	abstract, fulltext

Review

Crook et al. 2012	Crook, S. M., Bednar, J. A., Berger, S., Cannon, R., Davison, A. P., Djurfeldt, M., Eppler, J., Kriener, B., Furber, S., Graham, B., Plesser, H. E., Schwabe, L., Smith, L., Steuber, V. and van Albada, S.	Creating, documenting and sharing network models	Network: Computation in Neural Systems (2012) 23(4): 131-149 doi:10.3109/0954898X.2012.722743	abstract, fulltext
Einevoll et al. 2013	G.T. Einevoll, C. Kayser, N. Logothetis, and S. Panzeri	Modeling and analysis of local field potentials for studying the function of cortical circuits	Nature Reviews Neuroscience (2013) 14:770-785 doi:10.1038/nrn3599	abstract, (fulltext), BibTeX
Estebanez et al. 2014	Estebanez, L., Boustani, S. E. and Shulz, D. E.	What the whiskers tell the tactile brain	Med Sci (2014) 30: 93-98 doi:10.1051/medsci/20143001019	abstract

Book chapter

Crook et al. 2013	Crook., S. M., Davison, A. P. and Plesser, H. E.	Learning from the past: approaches for reproducibility in computational neuroscience	In: J.M. Bower (Ed.), 20 Years of Computational Neuroscience, Springer, ISBN 978-1-4614-1423-0 doi:10.1007/978-1-4614-1424-7_4	abstract
Einevoll et al. 2013b	G.T. Einevoll, H. Linden, T. Tetzlaff, S. Leski, K.H. Pettersen	Local field potential: biophysical origin and analysis	Principles of Neural Coding, pp. 37-59, edited by R. Quian Quiroga and S. Panzeri, CRC Press, 2013
Einevoll et al. 2013d	Einevoll, G., Lindén, H., Tetzlaff, T., Leski, S., and Pettersen, K.	Local field potentials: biophysical origin and analysis	in Quiroga and Panzeri (ed.) Principles of Neural Coding. Taylor & Francis CRC Press (2013): 37-59
van Albada et al. 2014	van Albada, S., Helias, M. and Diesmann, M.	Integrating brain structure and dynamics on supercomputers	"Springer Cham Heidelberg New York Dordrecht London ISBN: 978-3-319-12083-6 (print), 978-3-319-12084-3 (electronic) Lecture Notes in Computer Science 8603, 22-32 (2014) [10.1007/978-3-319-12084-3_3] " doi:10.1007/978-3-319-12084-3_3	fulltext

Conference contribution: talk

Denker et al. 2012b	Denker, M., Zehl, L., Brochier, T., Grün, S., Riehle, A.	Comparing the spatio-temporal organization of joint spiking and local field potential oscillations in motor cortex	Twenty First Annual Computational Neuroscience Meeting: CNS*2012, Decatur, GA, USA; BMC Neuroscience 2012, 13(Suppl 1):P127 doi:10.1186/1471-2202-13-S1-P127	abstract
Denker et al. 2014	Denker, M., Abrams, M., Wachtler, T., Davison, A. and Grün, S.	INCF workshop report: New perspectives on workflows and data management for the analysis of electrophysiological data.	Neuroinformatics 2014, Leiden, Netherlands, 08/25/2014 - 08/27/2014 doi:10.3389/conf.fninf.2014.18.00021	abstract
Denker et al. 2014b	Denker, M., Zehl, L., Yegenoglu, A., Wachtler, T., Davison, A. and Grün, S.	Improving Workflows and Data Management for the Analysis of Electrophysiological Data	Advances in Neuroinformatics 2014, AINI2014, Wako-shi, Japan, 09/25/2014 - 09/26/2014
Denkeret al 2013b	Denker, M. ; Grün, S.	Relationship of spiking activity & synchrony to LFP	Workshop on 'Modeling and Analysis of LFP', Ski, Norway, 01/08/2013 - 01/09/2013
Einevoll et al. 2013c	Einevoll, G. T., Leski, S. and Hagen, E.	Tutorial on LFPy: T3: Modeling and interpretation of extracellular potentials	CNS 2013, Paris, France	abstract
Grün 2012	Grün, S.	Interaction of Spike-Synchrony and the Local Field Potential	Invited Talk, University College London, United Kingdom; 11/29/2012.
Grün 2012b	Grün, S.	Data Driven Analysis of Spatio-Temporal Cortical Interaction	5th INCF Neuroinformatics Congress 2012 ; Munich ; Germany ; 09/10/2012 - 09/12/2012
Grün 2012c	Grün, S.	Worms and Braids	Talk at the 2nd Vision4Action Workshop; INT, CNRS-AMU, Marseille, France; 06/20/2012
Grün 2012d	Grün, S.	Dynamics and Interaction in the Cortical Network	Talk at the 7th Winter School IRTG 1328; RWTH Aachen, Germany; 11/02/2012
Grün 2012e	Grün, S.	Calibration and Testing of Spike Correlation Methods	Talk at the 1st INCF Workshop on Validation of Data-Analysis Methods; Stockholm, Sweden; 6/19/2012
Grün 2013	Grün, S.	Correlation Analysis of Parallel Spike Trains I. + II.	Berkeley Summer Course inMining and Modeling of Neuroscience Data (2013)
Grün 2013b	Grün, S.	Data-driven evaluation of functional correlations in (massively) parallel spike trains	Intern. Workshop on Brain-Inspired Computing. Cetraro, Italy. (2013)
Grün 2013c	Grün, S.	Dynamic Interactive Processing in the Biological Neuronal Network	SFB 917 - Seminar. Aachen, Germany (2013)
Grün 2013d	Grün, S.	Effect of Spike Sorting Errors on Unitary Event Analysis	2nd Vision for Action Workshop. Jülich, Germany (2013)
Grün 2013e	Grün, S.	Frequent Itemset Mining based Detection of Synchronous Spike Events in Massively Parallel Spike Trains	2nd J-G Project Meeting. Kyoto, Japan(2013)
Grün 2013f	Grün, S.	Multi-Channel Spike Correlation Analysis	Tutorial "Statistical Methods", INM Retreat 2013
Grün 2013g	Grün, S.	Spatio-Temporal Scales of Neuronal Interactions	11e Colloque Societe des Neurosciences. Lyon, France (2013)
Grün 2013h	Grün, S.	Statistical Evaluation of Synchronous Spike Patterns extracted by Frequent Item Set Mining	Modeling Neural Activity: Statistics, Dynamical Systems, and Networks. Lihue, Hawaii, USA. (2013)
Grün 2013i	Grün, S.	Statistical Methods for the Analysis of Multi-Channel Spike and LFP Data	Workshop Tools for the Analysis of Functional Data. Paris, France (2013)
Grün 2013j	Grün, S.	Uncovering Spatio-Temporal Cortical Interaction: Current activities, open problems	HBP Data Analysis - Visualization Coordination Meeting. Jülich, Germany (2013)
Grün 2014a	Grün, S.	Statistics and Workflows for the Analysis of Concerted Neuronal Activity During Complex Behavior	Symposium 'Active Vision in Natural Environments'. Osaka Univ, Japan, Dec 12, 2014
Grün 2014e	Grün, S.	Towards reproducible data analysis of massively parallel neuronal data during complex behavior	5th Annual Meeting of the GDR Multielectrods, Gif sur Yvette, France, 10/14/2014 - 10/15/2014
Grün 2014g	Grün, S.	Talk: Statistical methods for detection of assembly activity in massively parallel spike data	AREADNE 2014 - Research in Encoding And Decoding of Neural Ensembles, Nomikos Conference Centre Santorini, Greece
Grün 2015	Grün, S.	Towards Reproducible Analysis of Complex Electrophysiological Experiments	Community Session 'Reproducilibity in the neurosciences'. Univ Goettingen, Goettingen, Germany. March 19, 2015
Grün2013	Grün, S.	Human Brain Project - Scientific goals, Organization, Our role	Wissenswerte, Bremen, Germany, 11/25/2013 - 11/25/2013
Grün2013b	Grün, S.	Spike Synchrony and Spike-LFP Locking in Monkey Primary Visual Cortex during Free Viewing of Natural Scenes	Computational Neuroscience, Paris, France, 07/17/2013 - 07/17/2013
Helias et al. 2014a	Helias, M., Kunkel, S., Morrison, A. and Diesmann, M.	NEST, simulation technology for brain-scale networks at cellular and synaptic resolution	SOS18 Conference on distributed supercomputing, St. Moritz, Switzerland, 03/17/2014 - 03/20/2014
Kunkel et al. 2014c	Kunkel, S., Helias, M., Diesmann, M. and Morrison, A.	Specifying supercomputers for brain-scale neuronal network simulations	HPC for Life Science, Brussels, Belgium, 05/26/2014 - 05/27/2014
Kunkel et al. 2014d	Kunkel, S., Helias, M., Diesmann, M. and Morrison, A.	Supercomputer simulations of spiking neuronal networks	Progress on Brain-Like Computing, Stockholm, Sweden, 02/05/2014 - 02/06/2014
Kunkelet al 2013	Kunkel, S. ; Diesmann, M.	Simulation technology at cellular and synaptic resolution for the largest computers	EU - US workshop on Cortical Processors, Heidelberg, Germany, 10/14/2013 - 10/15/2013
Masson 2012	Masson, G. S.	Optimal encoding of speed information for tracking eye movements	Workshop on "Optimizing performance in dynamics environment" Amsterdam, NL, 2-5 July 2012
Masson 2012b	Masson, G. S.	Speed processing for ocular tracking and motion perception : same or different ?	CESAME, Departement de Neurosciences. Université Catholique de Louvain. Louvain, Belgique, 26 October 2012
Masson 2012c	Masson, G. S.	Behavioral receptive fields and cortical population dynamics.	Departemento de Electronca, Universidad Téchnica Federico Santa Maria, Valparaiso, Chili, 30 October 2012
Masson 2012d	Masson, G. S.	Behavioral receptive fields and cortical population dynamics	Hertie Institute for Brain Research. Tübingen. Germany. December 6th, 2012
Nowke et al. 2013	Nowke, C., Schmidt, M., van Albada, S. J., Eppler, J. M., Bakker, R., Diesmann, M., Hentschel, B. and Kuhlen, T.	VisNEST - Interactive Analysis of Neural Activity Data	BioVis Symposium at the IEEE BioVis 2013, 13-18 Oct. 2013, Atlanta, Georgia, USA
Rast et al. 2013	Rast, A., Partzsch, J., Mayr, C., Schemmel, J., Hartmann, S., Plana, L., Temple, S., Lester, D., Schueffny, R., Furber, S.	A Location-Independent Direct Link Neuromorphic Interface	International Joint Conference on Neural Networks (2013) doi:10.1109/IJCNN.2013.6706887
Schemmel et al. 2012a	Schemmel, J. and Grübl, A. and Kononov, A. and Meier, K. and Millner, S. and Schwartz, M. and Scholze, S. and Schiefer, S. and Hartmann, S. and Partzsch, J. and Mayr, C. and Schüffny, R.	Live Demonstration: A Scaled-Down Version of the BrainScaleS Wafer-Scale Neuromorphic System	IEEE International Symposium on Circuits and Systems 2012
Schmidt et al. 2013c	Schmidt, M. ; van Albada, S. ; Bakker, R. ; Diesmann, M.	A spiking multi-area network model of macaque visual cortex	Osaka, Japan, 07/02/2014 - 07/02/2014
Schmidt et al. 2014	Schmidt, M., Schücker, J., van Albada, S., Bakker, R., Helias, M. and Diesmann, M.	Multi-area network model of visual cortex	4th BrainScaleS plenary meeting, Manchester, Grossbritannien, 19 - 21 March 2014
van Albada et al. 2014c	van Albada, S., Helias, M. and Diesmann, M.	One-to-one relationship between effective connectivity and correlations in asynchronous networks	Bernstein Conference, Göttingen, Germany, 09/03/2014 - 09/05/2014
van Albada et al. 2014d	van Albada, S., Schmidt, M. and Diesmann, M.	NEST for large-scale simulations of physiology-based spiking networks	"Bernstein Network - Simulation Lab Neuroscience" HPC Workshop, Jülich, Germany, 06/04/2014 - 06/05/2014

Conference contribution: poster

	Medathati, K.N.V., Rankin, J., Kornprobst, P. and Masson, G.S.	A retinotopic neural fields model of perceptual switching in 2D motion integration	Annual Bernstein Conference 24-27 september 2013, Tuebingen, Germany
Bachmannet al 2013	Bachmann, C. ; Tetzlaff, T. ; Kunkel, S. ; Bamberger, P. ; Morrison, A.	Computational characteristics of recurrent neural networks under the influence of Alzheimer's disease	10th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/13/2013 - 03/16/2013
Bachmannet al 2013b	Bachmann, C., Tetzlaff, T., Kunkel, S., Bamberger, P. and Morrison, A.	Effect of Alzheimer's disease on the dynamical and computational characteristics of recurrent neural networks	22nd Annual Computational Neuroscience Meeting, CNS*2013, Paris, France, 07/13/2013 - 07/18/2013
Bachmannet al 2015	Bachmann, C. ; Tetzlaff, T. ; Kunkel, S. ; Morrison, A.	Effect of Alzheimer disease on the dynamical and computational characteristics of recurrent neural networks	11th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/18/2015 - 03/28/2015
Bakkeret al 2012	Bakker, R. ; Denker, M. ; Diesmann, M. ; Eppler, J. M. ; Grün, S. ; Grytskyy, D. ; Helias, M. ; Ito, J. ; Maximov, A. ; Schmidt, M. ; Tetzlaff, T. ; Torre, E. ; van Albada, S. ; Wiebelt, B. ; Zehl, L.	Planned activities in Jülich	BrainScales Conference, Jülich, Germany, 03/19/2012
Benjaminsson and Lansner 2011	Benjaminsson, S. and Lansner, A.	Extreme Scaling of Brain Simulations	Jülich Blue Gene/P Extreme Scaling Workshop 2011, Technical Report FZJ-JSC-IB-2011-02 available from http://www2.fz-juelich.de/jsc/docs/autoren2011/mohr1/
Bermudez et al. 2012	Bermudez, M., Courbonm D., Barthelemym F., Masson, G. S. and Vanzetta, I.	Effect of temporal frequency, color and contrast in V4 of the behaving macaque: neuronal responses and behavioral correlates	Abstracts of the 42nd Meeting of the Society for Neuroscience, October 2012, New Orleans, USA (2012)
Bogadhi et al. 2011	Bogadhi, A., Montagnini, A. and Masson, G.S.	Dynamical interaction between retinal and extra-retinal signals in motion integration for smooth pursuit	Journal of Vision (2011) 11(11): article 533 doi:10.1167/11.11.533	abstract
Borgelt et al. 2012b	Borgelt, C., Picado-Muino, D., Berger, D., Gerstein, G. and Grün, S.	Cell Assembly Detection With Frequent Itemset Mining	CNS 2012 ; Decatur ; USA ; 07/21/2012 - 07/26/2012 doi:10.1186/1471-2202-13-S1-P126	abstract
Bos et al. 2014	Bos, H., Schmidt, M., Jordan, J., Schücker, J., van Albada, S., Bakker, R., Diesmann, M., Helias, M. and Tetzlaff, T.	Cortical multi-layered, multi-area networks as a substrate for stochastic computing	HBP Workshop on Stochastic Neural Computation, Paris, France, 11/27/2014 - 11/28/2014
Canova et al. 2015	Canova, C;, Torre, E, Denker, M, Helias, M, Gerstein, G and Grün, S.	Statistical assessment and neuronal composition of active synfire chains	Poster presentation at German Neuroscience Society Meeting (NWG 2015). Göttingen, Germany. Mar. 21, 2015
Chavane et al. 2012a	Chavane, F., Reynaud, A., Montardy, Q. and Masson G. S.	Cortical origin of contextual modulations in motion integration: linking V1 population response to the behavioral ocular following response	Journal of Vision August (2012) 12(9): 758 doi:10.1167/12.9.758	abstract
Dahmen et al. 2013	Dahmen, D., Hagen, E., Stavrinou, M. L., Linden, H., Tetzlaff, T., van Albada, S., Diesmann, M., Grün, S. and Einevoll, G. T.	From spiking point-neuron networks to LFPs: a hybrid approach	Bernstein Conference, 25-27 September 2013, Tübingen, Germany
Dahmen et al. 2014	Dahmen, D., Hagen, E., Stavrinou, M.L., Lindén, H., Tetzlaff, T., van Albada, S., Diesmann, M., Grün, S. and Einevoll, G.T.	Computing local-field potentials based on a point-neuron network model of cat V1	SFN Neuroscience 2014, Washington, D.C., United States of America, 11/15/2014 - 11/19/2014
Dehghani et al. 2011	Dehghani, N., Peyrache, A., Eskandar, E., Madsen, J., Anderson, W., Donoghue, J., Halgren, E., Destexhe, A. and Cash, S.	Relationship between excitatory and inhibitory neuronal activity and local field potentials during human sleep.	Soc Neurosci Abstracts 37: 451.05
Deneux et al. 2012	Deneux, T., Sanz-Leon, P., Masquelier, T., Masson, G. S., Deco, G. and Vanzetta, I.	(2012) The spatiotemporal structure of ongoing and evoked activity investigated using optical imaging of voltage sensitive dyes in awake monkey V4	AREADNE Meeting, Juin 2012, Santorini, Greece (2012)
Denker et al. 2011a	Denker, M., Davison, A., Grün, S. and Diesmann, M.	How collaborative projects that involve complicated electrophysiological data sets profit from workflow design	Poster at the 4th INCF Congress of Neuroinformatics, Boston, USA doi:10.3389/conf.fninf.2011.08.00080	fulltext
Denker et al. 2011b	Denker, M., Davison, A., Grün, S. and Diesmann, M.	Towards guiding principles in workflow design to facilitate collaborative projects involving massively parallel electrophysiological data	BMC Neuroscience 2011, 12(Suppl 1):P131 doi:10.1186/1471-2202-12-S1-P131	fulltext
Denker et al. 2011d	Denker, M., Wirtssohn, S., Brochier, T., Grün, S. and Riehle, A.	Mapping the synchronization structure of LFP activity in motor cortex	Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T21-9B	abstract
Denker et al. 2011e	Denker, M., Brochier, T., Grün, S. and Riehle, A.	Spatial synchronization structure of field potentials and spikes in a delayed grip task	Front. Comput. Neurosci. (2011) Conference Abstract: BC11 : Computational Neuroscience & Neurotechnology Bernstein Conference & Neurex Annual Meeting 2011 doi:10.3389/conf.fncom.2011.53.00103	abstract
Denker et al. 2012	Denker, M., Zehl, L., Brochier, T., Riehle, A. and Grün, S.	Spatial organization of joint spiking and local field potential coherence in motor cortex.	Poster contribution at conference Neurovisionen 8; Aachen, Germany; 10/26/2012.
Denker et al. 2012c	Denker, M., Zehl, L., Brochier, T., Grün, S., Riehle, A.	Spatial organization of synchronized activity expressed by joint spiking and local field potentials in motor cortex	8th FENS Forum of European Neuroscience 2012, Barcelona, Spain	abstract
Denker et al. 2014a	Zehl, L., Kilavik, B., Diesmann, M., Brochier, T., Riehle, A. and Grün, S.	Characterizing spatially organized LFP beta oscillations in the macaque motor cortex	AREADNE 2014, Santorini, Greece, 06/25/2014 - 06/29/2014
Denker et al. 2015	Denker, M., Yegenoglu, A., Holstein, D., Torre, E., Jennings, T., Davison, A. and Grün, S.	elephant: An open-source tool for the analysis of electrophysiological data	Proceedings of the 11th Meeting of the German Neuroscience Society, Neuroforum (2015) T27-2B
Denkeret al 2013	Denker, M. ; Riehle, A. ; Diesmann, M. ; Grün, S.	Relating excess spike synchrony to LFP-locked firing rate modulations.	Annual CNS Meeting 2013, Paris, France, 07/13/2013 - 07/18/2013
Einevoll et al. 2014	Einevoll, G.T., Łeski, S. and Hagen, E.	Tutorial: Modeling and interpretation of extracellular potentials (T4)	CNS 2014, Québec City (Canada), http://www.cnsorg.org/cns-2014-tutorials#T4	abstract
Eppler et al. 2011	Eppler, J.M., Kunkel, S., Plesser, H.E., Gewaltig, M.-O., Morrison, A. and Diesmann, M.	NEST: An efficient simulator for spiking neural network models	Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T27-9B	abstract
EpplerM et al 2013	Eppler, J. M. ; Kunkel, S. ; Helias, M. ; Zaytsev, Y. ; Plesser, H. E. ; Gewaltig, M.-O. ; Morrison, A. ; Diesmann, M.	20 years of NEST: a mature brain simulator	INM Retreat 2013, Jülich, Germany, 07/02/2013 - 07/03/2013
Galluppi et al. 2012	Galluppi, F., Davies, S., Rast, A., Sharp, T., Plana, L. A. and Furber, S.	A hierachical configuration system for a massively parallel neural hardware platform	CF '12 Proceedings of the 9th conference on Computing Frontiers, Cagliari (2012): 183-192 doi:10.1145/2212908.2212934	abstract, fulltext
Gorchetchnikov et al. 2011	Gorchetchnikov, A., Cannon, R., Clewley, R., Cornelis, H., Davison, A., De Schutter, E., Djurfeldt, M., Gleeson, P., Hill, S., Hines, M., Kriener, B., Le Franc, Y., Lo, C.-C., Morrison, A., Muller, E., Plesser, H.E., Raikov, I., Ray, S., Schwabe, L. and Szatmary, B.	NineML: declarative, mathematically-explicit descriptions of spiking neuronal networks	Front. Neuroinform. Conference Abstract: 4th INCF Congress of Neuroinformatics doi:10.3389/conf.fninf.2011.08.00098	abstract
Grün 2012a	Grün, S.	Data Driven Analysis of Spatio-Temporal Cortical Interaction	GDR 2904 Multi-Electrodes - 3rd Annual Meeting Marseille ; Marseille ; France ; 10/25/2012 - 10/26/2012
Grün et al. 2012	Grün, S., Picado-Muino, D., Berger, D., Gerstein, G., Borgelt, C.	Detection of Neuronal Assemblies by Frequent Item Set Mining	Neuroinformatics 2012, Munich, Germany	abstract
Habenschuss et al. 2012	Habenschuss, S., Bill, J. and Nessler, B.	Homeostatic plasticity in Bayesian spiking networks as Expectation Maximization with posterior constraints	in Advances in Neural Information Processing Systems 25 (2012): 782-790	abstract, fulltext
Hageet al 2013	Hagen, E. ; Stavrinou, M. ; Lindén, H. ; Dahmen, D. ; Tetzlaff, T. ; van Albada, S. ; Grün, S. ; Diesmann, M. ; Einevoll, G. T.	Hybrid scheme for modeling LFPs from spiking cortical network models	Proceedings of NeuroInformatics 2013 NeuroInformatics 2013, Stockholm, Sweden, 08/27/2013 - 08/29/2013
Hagen et al. 2015	Hagen, E., Dahmen, D., Stavrinou, M.L., Linden, H., Tetzlaff, T., van Albada, S., Diesmann, M., Grün, S. and Einevoll, G.T.	Hybrid scheme for modeling local field potentials from point-neuron networks	11th Göttingen Meeting of the German Neuroscience Society, Göttingen, Germany, 03/18/2015 - 03/21/2015
Helias et al. 2012a	Helias, M., Kunkel, S., Eppler, J., Masumoto, G., Igarashi, J., Ishii, S., Fukai, T., Morrison, A. and Diesmann, M.	Spiking neuronal network simulation technology for contemporary supercomputers	INCF Meeting, 10-12 Sept 2012, Munich, Germany
Itoet al 2013	Ito, J. ; Mukai, M. ; Tamura, H. ; Grün, S.	Effects of Complex Background on the Object Selective Response of Current Source in the Inferior Temporal Cortex of Macaque Monkeys	Bernstein Conference 2013, Tübingen, Germany, 09/25/2013 - 09/27/2013
Itoet al 2013b	Ito, J. ; Mukai, M. ; Yamane, Y. ; Tamura, H. ; Grün, S.	Effects of complex background scene on object selectivity of current source density activities in the macaque inferior temporal cortex	36th European Conference on Visual Perception, ECVP2013, Bremen, Germany, 08/25/2013 - 08/29/2013
Krieneret al 2013	Kriener, B. ; Helias, M. ; Rotter, S. ; Diesmann, M. ; Einevoll, G. T.	How pattern formation in ring networks of excitatory and inhibitory spiking neurons depends on the input current regime	Computational Neuroscience Conference, CNS*2013, Paris, France, 07/13/2013 - 07/18/2013
Kunkel et al 2013	S. Kunkel, M. Schmidt, J. M. Eppler, H. E. Plesser, J. Igarashi, G. Masumoto, T. Fukai, S. Ishii, A. Morrison, M. Diesmann, and M. Helias.	From laptops to supercomputers: a single highly scalable code base for spiking neuronal network simulations.	BMC Neuroscience (2013) 14(Suppl 1):P163 doi:10.1186/1471-2202-14-S1-P163	abstract
Kunkelet al 2013b	Kunkel, S. ; Schmidt, M. ; Eppler, J. M. ; Igarashi, J. ; Masumoto, G. ; Fukai, T. ; Ishii, S. ; Plesser, H. E. ; Morrison, A. ; Diesmann, M. ; Helias, M.	Supercomputers ready for use as discovery machines for neuroscience	10th Meeting of the German Neuroscience Society, NWG 2013, Goettingen, Germany, 03/13/2013 - 03/18/2013
Lindén et al. 2011b	Lindén, H., Tetzlaff, T., Potjans, T.C., Pettersen, K.H., Grün, S., Diesmann, M. and Einevoll, G.T.	How local is the local field potential?	BMC Neuroscience 2011, 12(Suppl 1):O8 doi:10.1186/1471-2202-12-S1-O	fulltext
Maksimovet al 2012	Maksimov, A. ; van Albada, S. J. ; Diesmann, M.	Understanding global whisker motion detection through large-scale simulation of the rodent whisker system	Okinawa Computational Neuroscience Course 2012 Okinawa, Japan, 2012-06-11"
Maximovet al 2013	Maximov, A. ; van Albada, S. ; Diesmann, M.	Toward a biologically realistic spiking model of a rodent barrel column	Bernstein Conference 2013, Tuebingen, Germany, 09/25/2013 - 09/27/2013
Meso et al. 2013	Meso, A., Rankin, J., Kornprobst, P. and Masson, G.S.	Multi-stability in motion perception combines multiple underlying neural mechanisms	CoSyne meeting. 1-4 March 2013, Salt-Lake City, USA.
Millner et al. 2012	Millner, S., Hartel, A., Schemmel, J. and Meier, K.	Towards biologically realistic multi-compartment neuron model emulation in analog VLSI	ESANN 2012 proceedings, European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning. Bruges (Belgium), 25-27 April 2012	fulltext
Montagnini et al. 2012	Montagnini, A., Bogadhi, A. R. and Masson, G. S.	(2012) Dynamical integration of retinal and extra-retinal signals for smooth pursuit eye movements : a two stage bayesian model	Perception, ECVP Abstracts September 2012
Mukaiet al 2013	Mukai, M. ; Yamane, Y. ; Ito, J. ; Grün, S. ; Tamura, H.	Effects of complex background scene on object selectivity ofsingle-unit activities in the macaque inferior temporal cortex	36th European Conference on Visual Perception, ECVP2013, Bremen, Germany, 08/25/2013 - 08/29/2013
Nowke et al. 2012b	Nowke, C., Hentschel, B., Kuhlen, T., Eppler, J.M., van Albada, S., Bakker, R., Diesmann, M., Schmidt, M.	VisNEST - Interactive analysis of neural activity data	IEEE VisWeek 2012	abstract
Nowke et al. 2013b	Nowke, C., Schmidt, M., van Albada, S., Eppler, J., Bakker, R., Diesmann, M., Hentschel, B. and Kuhlen, T.	Interactive visualization of brain-scale spiking activity	Annual CNS Meeting 2013, BMC Neuroscience 2013, 14(Suppl 1):P110
Nowkeet al 2013	Nowke, C. ; Hentschel, B. ; Kuhlen, T. ; Schmidt, M. ; van Albada, S. ; Eppler, J. M. ; Bakker, R. ; Diesmann, M.	Interactive visualization of brain-scale spiking activity	Twenty Second Annual Computational Neuroscience Meeting, CNS 2013, Paris, France, 07/13/2013 - 07/18/2013
Partzsch et al. 2012	Partzsch, J. and Mayr, C. and Schiefer, S. and Hartmann, S. and Scholze, S. and Schüffny, R.	Highly Integrated Packet-Based Communication in a Neuromorphic Wafer System	University Booth at DATE (Design, Automation and Test in Europe) 2012
Partzsch et al. 2013	Partzsch, J., Mayr, C., Vogginger, B., Schueffny, R., Rast, A., Plana, L., Furber, S.	Live Demonstration: Ethernet Communication Linking Two Large-Scale Neuromorphic Systems	European Conference on Circuit Theory and Design (2013) doi:10.1109/ECCTD.2013.6662196
Peyrache et al. 2011b	Peyrache, A., Dehghani, N., Eskandar, E., Madsen, J., Anderson, W., Donoghue, J., Halgren, E., Cash, S.S. and Destexhe, A.	Spatio-temporal dynamics of neocortical excitation and inhibition during human sleep.	Soc Neurosci Abstracts 36: 451.06
Plesser et al. 2011	Plesser, H.E., Crook, S. and Davison, A.P.	Reproducible models and reliable simulations: Current trends in computational neuroscience	SIAM Computational Science and Engineering 2011, Reno, Nevada, February 2011
Potjans et al. 2011	Potjans, T.C., Kunkel, S., Morrison, A., Plesser, H.E. and Diesmann, M.	Beyond local cortical network modeling: linking microscopic and macroscopic connectivity in brainscale simulations	Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T26-6A	abstract
Raikov et al. 2011	Raikov, I., Cannon, R., Clewley, R., Cornelis, H., Davison, A., De Schutter, E., Djurfeldt, M., Gleeson, P., Gorchetchnikov, A., Plesser, H.E., Hill, S., Hines, M., Kriener, B., Le Franc, Y., Lo, C.-C., Morrison, A., Muller, E., Ray, S., Schwabe, L. and Szatmary, B.	NineML: the network interchange for neuroscience modeling language	BMC Neuroscience 2011, 12(Suppl 1):P330 doi:10.1186/1471-2202-12-S1-P330	abstract
Rast et al. 2013a	Rast, A., Partzsch, J., Mayr, C., Schemmel, J., Hartmann, S., Plana, L., Temple, S., Lester, D., Schüffny, R. and Furber, S.	A location-independent direct link neuromorphic interface	Neural Networks, International Joint Conference on, 2013, Dallas, TX, USA
schiefer11	Schiefer, S., Hartmann, S., Scholze, S., Partzsch, J., Mayr, C., Henker, S. and Schüffny, R.	Live Demonstration: Packet-Based AER with 3 GEvent/s Cumulative Throughput	IEEE International Symposium on Circuits and Systems ISCAS 2011, p. 1988
Schmidt et al. 2013	Schmidt, M., van Albada, S., Bakker, R. and Diesmann, M.	Toward a spiking multi-area network model of macaque visual cortex	Proceedings of the 10th Meeting of the German Neuroscience Society, Neuroforum 2013 : T24-10D (2013)
Schmidt et al. 2013b	Schmidt, M., van Albada, S., Bakker, R. and Diesmann, M.	Integrating multi-scale data for a network model of macaque visual cortex	Annual CNS Meeting 2013, BMC Neuroscience 2013, 14(Suppl 1):P111 (2013)
Schmidt et al. 2014c	Schmidt, M., van Albada, S., Bakker, R. and Diesmann, M.	A spiking multi-area network model of macaque visual cortex	Annual meeting of the SfN, SfN2014, Washington, DC, USA, 11/15/2014 - 11/19/2014
Schmidt et al. 2014d	Schmidt, M., van Albada, S., Bakker, R. and Diesmann, M.	Connectomics of a multi-area network model of macaque visual cortex	Micro-, meso- and macro-connectomics of the brain, Paris, Frankreich, 05/05/2014 - 05/05/2014
Schmidtet al 2013b	Schmidt, M. ; van Albada, S. ; Bakker, R. ; Diesmann, M.	Toward a spiking Multi-area network model of macaque visual cortex	10th Meeting of the German Neuroscience Society, NWG 2013, Goettingen, Germany, 03/13/2013 - 03/16/2013
Schmucker et al. 2011	Schmuker, M., Brüderle, D., Schrader, S. and Nawrot, M.	Ten thousand times faster: Classifying multidimensional data on a spiking neuromorphic hardware system.	Poster presented at BC11 - Bernstein Conference 2011 Computational Neuroscience / Neurotechnology and Neurex Annual Meeting, 04 October 2011 doi:10.1038/npre.2011.6547.1
Schultze-Kraft et al. 2011	Schultze-Kraft, M., Diesmann, M., Grün, S. and Helias, M.	Correlation transmission of spiking neurons is boosted by synchronous input	BMC Neuroscience 2011, 12(Suppl 1):P144 doi:10.1186/1471-2202-12-S1-P144	fulltext
Stavrinou et al. 2015	Stavrinou, M.L., Hagen, E., Dahmen, D., Linden, H., Tetzlaff, T., van Albada, S., Diesmann, M., Grün, S. and Einevoll, G.T.	Computing local field potentials based on spiking cortical networks	Neuro Informatics 2014, Leiden, Netherlands, 08/25/2014 - 08/27/2014
Strokovet al 2013	Strokov, S. ; Ito, J. ; Tamura, H. ; Grün, S.	Spatio-temporal modulations of object selectivity in the inferior temporal cortex	Bernstein Conference 2013, Tübingen, Germany, 09/25/2013 - 09/27/2013
Suzukiet al 2013	Suzuki, M. ; Yamane, Y. ; Ito, J. ; Strokov, S. ; Fujita, I. ; Maldonado, P. ; Grün, S. ; Tamura, H.	Factors affecting human gaze behavior: an analysis with complex natural scenes with superimposed object images	36th European Conference on Visual Perception, ECVP2013, Bremen, Germany, 08/25/2013 - 08/29/2013
Teeters et al. 2013	Teeters, J.L., Benda, J., Davison, A.P., Eglen, S., Gerhard, S., Gerkin, R.C., Grewe, J., Harris, K., Jackson, T., Moucek, R., Pröpper, R., Sessions, H.L., Smith, L.S., Sobolev, A., Sommer, F.T., Stoewer, A. and Wachtler, T.	Considerations for developing a standard for storing electrophysiology data in HDF5	Neuroinformatics 2013, Stockholm, Sweden, 27 Aug - 29 Aug, (2013) doi:10.3389/conf.fninf.2013.09.00069	abstract
Tetzlaff et al. 2014b	Tetzlaff, T., Dahmen, D., Hagen, E., Stavrinou, M.L., Lindén, H., van Albada, S., Diesmann, M., Grün, S. and Einevoll, G.T.	Computing local-field potentials based on a point-neuron network model of cat V1	NeuroVisionen 10 meeting, Jülich, Germany, 09/26/2014 - 09/26/2014
Tetzlaff et al. 2015	Tetzlaff, T., Hagen, E., Dahmen, D., Stavrinou, M.L., Linden, H., van Albada, S., Grün, S., Diesmann, M. and Einevoll, G.T.	Hybrid scheme for modeling local field potentials from point-neuron networks	2nd International Symposium of the Clinical Research Group 219, Cologne, Germany, 02/26/2015 - 02/28/2015
Thanasoulis 2012a	Thanasoulis, V., Partzsch, J., Hartmann, S., Mayr, C. and Schüffny, R.	Dedicated FPGA Communication Architecture and Design for a Large-Scale Neuromorphic System	9th IEEE International Conference on Electronics, Circuits, and Systems 2012
Thanasoulis 2012b	Thanasoulis, V., Partzsch, J., Hartmann, S., Mayr, C. and Schüffny, R.	Long-Term Pulse Stimulation and Recording in an Accelerated Neuromorphic System	9th IEEE International Conference on Electronics, Circuits, and Systems 2012
thanasoulis11	Thanasoulis, V. and Hartmann, S. and Ehrlich, M. and Partzsch, J. and Mayr, C. and Schüffny, R.	Long-Term Pulse Stimulation and Recording in an Accelerated Neuromorphic System	Dresdner Arbeitstagung Schaltungs und Systementwurf (DASS 2011), p. 72-77
van Albada et al. 2013	van Albada, S.J., Schrader, S., Helias, M. and Diesmann, M.	Influence of different types of downscaling on a cortical microcircuit model	BMC Neuroscience 2013, 14(Suppl 1):P112 doi:10.1186/1471-2202-14-S1-P112	abstract
Van Albadaet al 2013	van Albada, S. ; Maximov, A. ; Schmidt, M. ; Bakker, R. ; Schrader, S. ; Lester, D. ; Diesmann, M.	Cortical multi-layer models for down-scaled implementation on neuromorphic hardware and full-scale implementation on supercomputers	3rd BrainScaleS plenary meeting, Marseille, France, 03/21/2013 - 03/22/2013
Wirtssohn et al. 2011	Wirtssohn, S., Brochier, T., Denker, M., Grün, S. and Riehle, A.	Mapping the spatial structure of LFP activity in motor cortex	Poster at the Ninth Göttingen Meeting of the German Neuroscience Society 2011: T21-8B	abstract
Zehl et al. 2012	Zehl, L., Brochier, T., Riehle, A., Grün, S., Denker, M.	Spatial organization of beta-band local field potential oscillations during delayed reach to grasp movements	3rd Workshop of the GDR 2904 'Multielectrode systems', Marseille, France (2012)
Zehl et al. 2013	Zehl, L. ; Brochier, T. ; Riehle, A. ; Grün, S. ; Denker, M.	Spatio-temporal organization of local field potential oscillations in the monkey motor cortex	10th Göttingen Meeting of the German Neuroscience Society, NWG2013, Göttingen, Germany, 03/13/2013 - 03/16/2013
Zehl et al. 2014b	Zehl, L., Denker, M., Stoewer, A., Jaillet, F., Brochier, T., Riehle, A., Wachtler, T. and Grün, S.	Metadata management for complex neurophysiological experiments	AREADNE 2014, Santorini, Greece, 06/25/2014 - 06/29/2014
Zehl et al. 2014c	Zehl, L., Denker, M., Adrian, S., Florent, J., Thomas, B., Alexa, R., Thomas, W. and Grün, S.	Handling complex metadata of neurophysiological experiments	INCF Neuroinformatics 2014, Leiden, Netherlands, 08/25/2014 - 08/27/2014 doi:10.3389/conf.fninf.2014.18.00029	abstract
Zehl et al. 2015	Zehl, L., Denker, M., Stoewer, A., Jaillet, F., Brochier, T., Riehle, A., Wachtler, T. and Grün, S.	How to efficiently organize and exploit metadata metadata of complex electrophysiological experiments	Proceedings of the 11th Meeting of the German Neuroscience Society, Neuroforum (2015) T27-1C

PhD Thesis

Jeltsch 2014

Jeltsch, S.

A Scalable Workflow for a Configurable Neuromorphic Platform

PhD thesis (2014) at the University of Heidelberg

fulltext

Master/Diploma Thesis

Grabuschnig 2014

S. Grabuschnig

The role of inhibitory networks in the self-organization of cortical microcircuits.

Master Thesis 2014 Graz University of Technology

abstract, fulltext

Bachelor Thesis

Billaudelle 2014	Billaudelle, S.	Characterisation and Calibration of Short Term Plasticity on a Neuromorphic Hardware Chip	Bachelor thesis at University of Heidelberg (2014)	abstract, fulltext
Hüll 2014	Hüll, S.	Testen eines Floating-Gate Analogspeichers in 65nm Single-Poly Technologie	Bachelor thesis at University of Heidelberg (2014)	abstract, fulltext

Web publication

Benjaminsson et al. 2011	Benjaminsson, S., Silverstein, D., Herman, P., Melis, P., Slavnic, V., Spasojevic, M., Alexiev, K. and Lansner, A.	Visualization of output from Large-Scale Brain Simulations	Partnership for Advanced Computing in Europe (PRACE), Project ID: PRPC06	fulltext
Nowke et al. 2013c	Nowke, C., Schmidt, M., van Albada, S., Eppler, J., Bakker, R., Diesmann, M., Hentschel, B. and Kuhlen, T.	VisNEST - Interactive analysis of neural activity data	Video posted on vimeo: http://vimeo.com/82512745	fulltext
van Albada et al. 2014b	Van Albada, S., Diesmann, M., Eppler, J.M., Hentschel, B., Kuhlen, T.. Nowke, C., Reske, M. and Schmidt, M.	Modellierung und 3D-Visualisierung neuronaler Netzwerke in der Grössenordnung des Gehirns	RWTH Themen (2014) 2: 52-57	fulltext
van Albada et al. 2014e	van Albada, S.J., Helias, M. and Diesmann, M.	Scalability of asynchronous networks is limited by one-to-one mapping between effective connectivity and correlations	arXiv:1411.4770	abstract, fulltext

Other

	Rehn, E., Benjaminsson, S. and Lansner, A.	Event-based Sensor Interface for Supercomputer scale Neural Networks	KTH technical report TRITA-CSC-CB, ISSN 1653-5707; 2012:02	abstract, fulltext
Bachmannet al. 2014	Bachmann, C., Tetzlaff, T., Kunkel, S. and Morrison, A.	Effect of Alzheimer's disease on the dynamical and computational characteristics of recurrent neural networks	INM Retreat 2014, Juelich, Germany, 01/07/2014 - 02/07/2014
Canova et al. 2014	Canova, C., Torre, E., Denker, M., Gerstein, G. and Grün, S.	Statistical Assessment and Neuronal Composition of Active Synfire Chains	INM Retreat 2014, Jülich, Germany, 07/01/2014 - 07/02/2014
Chorley et al. 2014	Chorley, P., Diesmann, M., Helias, M. and Grün, S.	Correlated rate vector dynamics in motor cortex	INM Retreat, Jülich, Germany, 07/01/2014 - 07/02/2014
Dahmen et al. 2014b	Dahmen, D., Hagen, E., Stavrinou, M.L., Lindén, H., Tetzlaff, T., van Albada, S., Diesmann, M., Grün, S., Einevoll, G.T.	From spiking point-neuron networks to LFPs: a hybrid approach	BrainScaleS 4th plenary meeting, Manchester, United Kingdom, 03/19/2014 - 03/21/2014
Denker et al. 2014c	Denker, M., Yegenoglu, A., Davison, A. and Grün, S.	Towards a Unifying Tool for the Analysis of Electrophysiological Data Sets based on Neo	INM Retreat 2014, Jülich, Germany, 07/01/2014 - 07/02/2014
Denker et al. 2014d	Denker, M., Zehl, L., Kilavik, B., Diesmann, M., Brochier, T., Riehle, A. and Grün, S.	Characterizing Spatially Organized LFP Beta Oscillations in Motor Cortex	INM Retreat 2014, Jülich, Germany, 07/01/2014 - 07/02/2014
Grün 2014	Grün, S.	Obtaining and analyzing massively parallel spike data in relation to behavior	4th BrainScaleS plenary meeting, Manchester, Grossbritannien,
Grün 2014b	Grün, S.	Talk: Spike Synchrony: From Cross-Correlations to Higher Order Analysis Methods	SPP 1665 Analytical Workshop: Analysis and Management of Electrophysiological Activity Data, Juelich, 24.-27.11.2014
Grün 2014c	Grün, S.	Accessing the spatio-temporal organization of cortical activity during complex behavior	Department of Psychology and Neuroscience, Maastricht Univ, NL (2014)
Grün 2014d	Grün, S.	Statistical methods for detection of assembly activity in massively parallel spike data	Workshop at the Carnegie Mellon University,Pittsburgh, USA, 07/24/2014 -
Grün 2014f	Grün, S.	Talk: Detection of assembly activity in massively parallel spike data: Workflow and statistics	BCCN Heidelberg-Mannheim, Heidelberg, Germany (2014)
Grün 2014h	Grün, S.	Spatio-temporal organization of cortical processing during complex behavior	Center for Information and Neural Networks, Osaka University, Japan (2014)
Grün 2014i	Grün, S.	Accessing the spatio-temporal organization of cortical activity during complex behavior	RIKEN BSI, Wako-Shi, Japan (2014)
Grün 2014j	Grün, S.	Talk: Accessing the spatio-temporal organization of cortical activity during complex behavior	Hertie Institute for Clinical Brain Research, Tübingen, Germany (2014)
Gruen and Diesmann 2012	Gruen, S. and Diesmann, M.	Hirnforschung braucht ein Netzwerk: Computational and Systems Neuroscience am Forschungszentrum Juelich	systembiologie.de (2012) 4: 36-39	fulltext
Kunkel et al. 2012	Kunkel, S., Helias, M., Potjans, T. C., Eppler, J. M., Plesser, H.E., Diesmann, M. and Morrison, A.	Memory Consumption of Neuronal Network Simulators at the Brain Scale	in Binder K, Münster G, Kremer M (Eds) NIC Symposium 2012 Proceedings NIC Series Vol. 45, page 81, Jülich, Germany, ISBN 978-3-89336-758-0	fulltext
Maximov et al. 2014	Maximov, A., van Albada, S. and Diesmann, M.	Calibration of a simulated cortical microcircuit using slice data.	INM Retreat 2014, Juelich, germany, 07/01/2014 - 07/02/2014
Schücker et al. 2014	Schücker, J., Schmidt, M., van Albada, S., Diesmann, M. and Helias, M.	Stability analysis of a multi-area network model of macaque visual cortex	INM Retreat 2013, Juelich, Germany, 07/01/2014 - 07/02/2014
Schmidt et al. 2014b	Schmidt, M., Schücker, J., van Albada, S., Bakker, R., Helias, M. and Diesmann, M.	Multi-area network model of visual cortex	4th BrainScales plenary meeting, Manchester, Grossbritannien, 03/19/2014 - 03/21/2014
Tetzlaff et al. 2014c	Tetzlaff, T., Dahmen, D., Hagen, E., Stavrinou, M. L., Lindén, H., van Albada, S., Diesmann, M., Grün, S. and Einevoll, G.T.M.	Poster: Computing local-field potentials based on a point-neuron network model of cat V1	INM retreat, Jülich, Germany, 07/01/2014 - 07/02/2014
van Albada 2014	van Albada, S.	Microcircuit model of early sensory cortex - Porting to the Hybrid Multiscale Facility (HMF)	4th BrainScaleS Plenary Meeting, Manchester, UK, 03/20/2014 - 03/21/2014
van Albada 2014b	Van Albada, S.	Multi-Area Model of Macaque Visual Cortex & Scaling Asynchronous Networks with Attention to Covariances	The University of Sydney, Australia, 09/23/2014
van Albada and Diesmann 2014	van Albada, S. and Diesmann, M.	NEST HPC status - technology and theory	BrainScaleS Demo 1, 2 and 3 workshop, Gif-sur-Yvette, France, 11/25/2014 - 11/26/2014
van Albada and Rowley 2014	van Albada, S. and Rowley, A.	BrainScaleS Demo 1.1 - Microcircuit model of early sensory cortex. Status update	BrainScaleS Demo 1, 2 and 3 workshop, Gif-sur-Yvette, France, 11/25/2014 - 11/26/2014
van Albada et al. 2014l	van Albada, S., Schmidt, M., Bakker, R. and Diesmann, M.	Spiking multi-area model of macaque visual cortex	INM Retreat 2014, Jülich, Germany, 07/01/2014 - 07/02/2014
Zehl et al. 2014	Denker, M., Stoewer, A., Jaillet, F., Brochier, T., Riehle, A., Wachtler, T. and Grün, S.	Organizing Metadata of Complex Neurophysiological Experiments	INM Retreat 2014, Juelich, Germany, 07/01/2014 - 07/02/2014